Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934220.1_cds_XP_016480360.1_71810
CDS Infomation

[gene=LOC107801528] [db_xref=GeneID:107801528] [protein=U-box domain-containing protein 35-like isoform X3] [protein_id=XP_016480360.1] [location=join(21263..21485,22299..22417,22594..22712,22920..23134,23226..23289,24467..24644,25201..25302,25378..25806,25903..26661,27027..27111,27404..27420)] [gbkey=CDS]
Sequence

ATGTTTTGCAAGTTGAGACTGATCAAAAGGGAAAAGATGTGGCTCCCAAACAATAAGGGA
AGCCCTGCAAACAGAAGGGGAAATGGGACTGGAGTTGTTGCAATTGCTATTGACAAAGAC
AAAGGCAGCCAATATGCTATCAAATGGGCCACTGACAATTTGGTTAACAGAGGCCAAACT
CTTGTCCTTGTCCATGTTGTCACCAAGCCTACTTCTTCCTCCTACGGAAACTGTGGTGGA
GTTCACGTCGTAGATGGAAATTTATCTGCACATGGGCAAAATCTTGAGAAACAAACCAAA
GAATTGTTTCTTACCTTTCATTGTTTTTGTACACGTAAAGATGTTCGTTGCTTAGATGTT
ATACTTGAAGACTCAGATGTAACAAAAGCACTGACAGAATATGTGTCTAGTGCAGCGATC
CAGAACTTGGTCCTTGGAGCATCTAGGCATGGCTTTATCAGACGGTTGAAGGTTACGGAT
ATACCTAGCACTGTATCAAAGGGAGCACCAGATTTCTGCACTGTTTATGTCATCTCAAAG
TCAAAGATTTCTTCTGTGAAAAATGCTTCTCGCCCAGCCCCTATGGCTTCCCCTCTTTAT
AAACAAATACAGCAATTGGAAGAGCAAGTTAATAGTGGTGGAATTACCCCTACTGCTCGT
ACCAGGGCGATCCATGCTGGATCAGTTGTGGACAGGTCACAACGCAGGTCATTCATATCG
GATGAGAGCAAAAAAATTGGCTCTGGTAGGCCAAGCACTGATCACACATCTTCCATGCTG
TATCATGATGGCATGGATTCTGGCCGTATTTCACAAATATCAACTAGTTCAGATAGTAGC
TTTGGCTCAGAACGCTTGGGAGCTCGGGGGAGTGAGCTCAGTTCTTTCAATGACTTTTCA
TCTTCCTCCTTTGAGACAGATGATGGAGAGGCTGAAATGAGAAGGCTAAAGATGGAGCTT
CAGAGGACAATGGATTTGTACAGCACAGCATGCAAGGAAGCACTGACGGCGAAACAGAAG
TCAGAGGAGCTCAATGTCTGGCGGATGGAGGAGGAGAAGAGATTGGAGGAGGCTCGGCTT
GCAGAGGAAGCTGCAAAATTAGCAGCAGAGAAGGAGAGAGATAAGTGTAAGGTTGCTATG
GAAACTGCCGAAGCAGCTCAGAGACTCGCAGAACTTGAAGCAAAAAGAAGGGTAGATGCT
GAAATGCAAGCCCTTAAAGAGGCAGAGCAGAAGGAGAAAGCATTTATGAACTTAGGTCAA
GGTGATTTCAGATATAGGAGGTACAGCATCGAAGAAATCGAAGAGGCAACACATTTTTTC
ACTGATTCTCTCAAGATTGGAGAAGGAGGATATGGTCCTGTCTACAAATGTTATCTTGAT
CACACGCCAGTAGCAATCAAGATCTTACGTCCAGATGCAGCACAAGGAAGATCTCAATTT
CAGCAAGAGGTTGAAGTGCTAAGTCGTATGAGGCATCCTAATATGGTACTACTTCTTGGA
GCTTGCCCGGAATATGGCTGTTTGGTATATGAGTACATGGCAAATGGCAGTTTAGAGGAA
CGCCTTATGCGATGTGGAGATAAACGTTCACTGTCATGGCAGCTTAGATTTCGTATTGCA
GCGGAGATCGCCACCGGCTTGCTTTTTCTGCACCAGACCAAGCCAGAACCTCTGGTGCAT
CGTGACCTTAAACCTGGCAACATTCTGCTTGACCATAATTATGTAAGCAAGATTAGTGAT
GTTGGACTCTCAAGGCTTGTTCCTCCTTCTACTACTGAAGAGGTAACACAATACCGGATA
ACATCTGCAGCTGGCACCTTCTGCTACATCGATCCAGAGTATCAACAAACAGGCATGCTT
GGGGTTAAATCTGATGTTTATTCCTTTGGAATACTTCTACTACAATTGGTAACAGCCAAG
CCAGCAATGGGTATAACTCATTATGTTTCACAGTGCATTGAGACGGGAGAGTTTAAAGAG
GTACTAGATCCCTCAGTTCCAGATTGGCCAATCGAAGAGGCCCTGACTTTTGCAAAGCTA
GCACTCCAATGTGCAGAACTGAGGCGGAAGGACAGGCCAGACCTTGGCAAAGTTGTCTTG
CCCGAGCTTAATCGATTGAGAGCATTGACTGAAGAAAATATGGGTCAATTGTTGATAGGT
GGCAGTGCTAGCCCCTCCCCCAGTCACAGCCAAGCTTCTATATCGCAGGAAATTTCAAGT
GAACCTCAAGTGCATTCAGGATTTAGTACAAAAAGTGTTTCAAACTCATCTGCTTCGCAA
GAAAAACATTCAGGATCAGGGGATGAATAA

Peptide Sequence

PEP ID

XP_016480360.1
PEP Infomation

PREDICTED: U-box domain-containing protein 35-like isoform X3 [Nicotiana tabacum]
Sequence

MFCKLRLIKREKMWLPNNKGSPANRRGNGTGVVAIAIDKDKGSQYAIKWATDNLVNRGQT
LVLVHVVTKPTSSSYGNCGGVHVVDGNLSAHGQNLEKQTKELFLTFHCFCTRKDVRCLDV
ILEDSDVTKALTEYVSSAAIQNLVLGASRHGFIRRLKVTDIPSTVSKGAPDFCTVYVISK
SKISSVKNASRPAPMASPLYKQIQQLEEQVNSGGITPTARTRAIHAGSVVDRSQRRSFIS
DESKKIGSGRPSTDHTSSMLYHDGMDSGRISQISTSSDSSFGSERLGARGSELSSFNDFS
SSSFETDDGEAEMRRLKMELQRTMDLYSTACKEALTAKQKSEELNVWRMEEEKRLEEARL
AEEAAKLAAEKERDKCKVAMETAEAAQRLAELEAKRRVDAEMQALKEAEQKEKAFMNLGQ
GDFRYRRYSIEEIEEATHFFTDSLKIGEGGYGPVYKCYLDHTPVAIKILRPDAAQGRSQF
QQEVEVLSRMRHPNMVLLLGACPEYGCLVYEYMANGSLEERLMRCGDKRSLSWQLRFRIA
AEIATGLLFLHQTKPEPLVHRDLKPGNILLDHNYVSKISDVGLSRLVPPSTTEEVTQYRI
TSAAGTFCYIDPEYQQTGMLGVKSDVYSFGILLLQLVTAKPAMGITHYVSQCIETGEFKE
VLDPSVPDWPIEEALTFAKLALQCAELRRKDRPDLGKVVLPELNRLRALTEENMGQLLIG
GSASPSPSHSQASISQEISSEPQVHSGFSTKSVSNSSASQEKHSGSGDE

Transcript Sequence

Gene sequence data has not been registered.